BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B04SP1|AL427260
(782 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1691 1414 0.0
>3x_Contig1691
Length = 15574
Score = 1414 bits (702), Expect = 0.0
Identities = 745/771 (96%), Gaps = 1/771 (0%)
Strand = Plus / Plus
Query: 1 tcaactcctcatgcccaatttgactgtygctattttccccagtgacaatgccatgagcaa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6974 tcaactcctcatgcccaatttgactgtcgctattttccccagtgacaatgccatgagcaa 7033
Query: 61 tcctagcaacatcgtaaagwatctttgcagttaatccccaaacatttttacagagaatac 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 7034 tcctagcaacatcgtaaagaatctttgcagttaatccccaaacatttttacagagaatac 7093
Query: 121 tgttgawctgttcatccccagawctttcatctatwacatctttcacccattgtgattctc 180
|||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 7094 tgttgaactgttcatccccagaactttcatctataacatctttcacccattgtgattctc 7153
Query: 181 caatwttttccattggatagtwatagtwccgawgtggccatttcaaaccaccccatttat 240
|||| |||||||||||||||| ||||| |||| |||||||||||||||||||||||||||
Sbjct: 7154 caatattttccattggatagtaatagtaccgaagtggccatttcaaaccaccccatttat 7213
Query: 241 wawtgtgctgctcgcgagctatatactcaggtttatwacccttccattccttatgctcat 300
| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 7214 aaatgtgctgctcgcgagcaatatactcaggtttataacccttccattccttatgctcat 7273
Query: 301 ggcatatcagatcacttaatgggatagawaatwacgaggaagtttcaccagcgttcaatt 360
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 7274 ggcatatcagatcacttaatgggatagaaaataacgaggaagtttcaccagcgttcaatt 7333
Query: 361 tggcaaagattttggatatgtttwacggttcttcaaaacgtctgccgttttcagaagcwa 420
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 7334 tggcaaagattttggatatgtttaacggttcttcaaaacgtctgccgttttcagaagcaa 7393
Query: 421 atttwctgttatacatgatacataccaagggcttgacactaaggtatgtcttggaaagat 480
|||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 7394 atttactgttatacatgaaacataccaagggcttgacactaaggaatgtcttggaaagat 7453
Query: 481 aatgcggtasgttntcacatactggatcgatctgtaaaccgtattcatcacgtaatacaa 540
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7454 aatgcggtagcgtttcacatactggatcgatctgtaaaccgtattcatcacgtaatacaa 7513
Query: 541 cggggtccctgggtaaaccgatttcctcttccgtttcccgtaatgcaacttcttgaaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7514 cggggtccctgggtaaaccgatttcctcttccgtttcccgtaatgcaacttcttgaaatg 7573
Query: 601 attcgaagccattatcagccttcccgccaggcaaaagacacttgaccagcaaaggatctc 660
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 7574 attcgaagccattatcagccttcccgccaggc-aaagacacttgaccagcaaaggatctc 7632
Query: 661 aatttcctagatcgtttagtcaataatactctaagttcacccctagtaccgacaaatagc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7633 aatttcctagatcgtttagtcaataatactctaagttcacccctagtaccgacaaatagc 7692
Query: 721 agaaccagtacagcggatcttctactggcaggccaagtacatggagtsgga 771
||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 7693 agaaccagtacagcggatcttctactggcaggccaagtacatggagtcgga 7743
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3739
Number of Sequences: 1807
Number of extensions: 3739
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 782
length of database: 10,358,551
effective HSP length: 16
effective length of query: 766
effective length of database: 10,329,639
effective search space: 7912503474
effective search space used: 7912503474
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)